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2024 Faculty Courses School of Science Department of Earth and Planetary Sciences Graduate major in Earth-Life Science

Earth-Life Science A

Academic unit or major
Graduate major in Earth-Life Science
Instructor(s)
Ryuhei Nakamura / Shawn Mcglynn / Tony Z Jia / Naohiro Terasaka / Yamei Li
Class Format
Lecture
Media-enhanced courses
-
Day of week/Period
(Classrooms)
3-4 Mon / 3-4 Thu
Class
-
Course Code
ELS.C401
Number of credits
200
Course offered
2024
Offered quarter
1Q
Syllabus updated
Mar 14, 2025
Language
English

Syllabus

Course overview and goals

Why do chemical reactions occur and what controls their rates? These questions will be discussed from the point of view of geochemistry, catalytic chemistry, thermodynamics, polymer chemistry and materials chemistry. In particular, the lecture will focus on fundamental reactions (synthesis of organic molecules from inorganic materials, polymer formation, etc.) that are essential for understanding the origin of life and directly related to global energy and environmental issues.

Course description and aims

By taking this course, students will acquire state-of-the-art knowledge on the origin of life (more specifically, chemical evolution). By studying the origin of life from multiple perspectives based on thermodinamics, reaction kinetics, electrochmneistry, and polymer chemistry, students will acquire the ability to extract the chemical strengths and weaknesses of each theory.

Keywords

Origin of life, reaction kinetics, electrochmneistry, and polymer chemistry

Competencies

  • Specialist skills
  • Intercultural skills
  • Communication skills
  • Critical thinking skills
  • Practical and/or problem-solving skills

Class flow

Each of the five faculty members will give two or three lectures, which will include an overview of each field in the origin of life (chemical evolution) and an explanation of the latest topics in the field using PowerPoint presentations.

Course schedule/Objectives

Course schedule Objectives
Class 1

Introduction and Equilibrium thermodynamics

Explain equilibrium thermodynamics

Class 2

Redox reaction

Explain redox reaction

Class 3

Kinetics of redox reaction Membrane energetics

Understand the mechanism of membrane-mediated chemical energy conversion

Class 4

Chemical kinetics

Explain kinetics of chemical reaction

Class 5

Chemical reaction network

Explain the characteristics of chemical reactions consisting of multiple elementary reactions.

Class 6

Perspectives of Entropy 

Explain entropy and connect this to the second law of thermodynamics

Class 7

Reaction Mechanisms  

Explain the mechanism of chemical reaction

Class 8

Mineral catalysis and its role in Prebiotic-chemistry

Study on research trends on mineral catalysis and its role in prebiotic-chemistry

Class 9

Organic chemistry at meteorites

Study on research trends on organic chemistry at meteorites

Class 10

RNA world

Study on research trends on RNA world

Class 11

Biopolymer (peptide, DNA, RNA formation)

Study the formation mechanism and properties of biomacromolecules.

Class 12

Self-organization/phase separation/compartmentalization

Study on research trends on protocell

Class 13

Presentation 1

From the views of thermodynamics, reaction kinetics, electrochemistry, and polymer chemistry etc, discuss the strengths and weaknesses of origin-of-life theory.

Class 14

Presentation 2

From the views of thermodynamics, reaction kinetics, electrochemistry, and polymer chemistry etc, discuss the strengths and weaknesses of origin-of-life theory.

Study advice (preparation and review)

To enhance effective learning, students are encouraged to spend approximately 100 minutes preparing for class and another 100 minutes reviewing class content afterwards (including assignments) for each class.
They should do so by referring to textbooks and other course material.

Textbook(s)

None

Reference books, course materials, etc.

If necessary, materials will be distributed at the beginning of the lecture and explanations will be given using PowerPoint.

Evaluation methods and criteria

Evaluation will be based on the submission of assignments and presentations.

Related courses

  • ELS.C402 : Earth-Life Science B
  • ELS.C403 : Earth-Life Science C

Prerequisites

There are no specific course requirements, but students should have a basic knowledge of chemistry.

Other

None